變更
On 2023年9月6日 上午1:19:41 [+0800], Tzu-Hao Lin:
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f | 1 | { | f | 1 | { |
2 | "ark": "ark:37281/k5d515442", | 2 | "ark": "ark:37281/k5d515442", | ||
3 | "author": "Tzu-Hao Lin, Tomonari Akamatsu, Frederic Sinniger, Saki | 3 | "author": "Tzu-Hao Lin, Tomonari Akamatsu, Frederic Sinniger, Saki | ||
4 | Harii", | 4 | Harii", | ||
5 | "author_email": null, | 5 | "author_email": null, | ||
6 | "contact_email": "schonkopf@gmail.com", | 6 | "contact_email": "schonkopf@gmail.com", | ||
7 | "contact_person": "Tzu-Hao Lin", | 7 | "contact_person": "Tzu-Hao Lin", | ||
8 | "creator_user_id": "4ed8099e-7518-41c7-8092-cc9c3f0a07eb", | 8 | "creator_user_id": "4ed8099e-7518-41c7-8092-cc9c3f0a07eb", | ||
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11 | "multimedia", | 11 | "multimedia", | ||
12 | "science" | 12 | "science" | ||
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14 | "end_time": "2018-07", | 14 | "end_time": "2018-07", | ||
15 | "erc_what": "Coral Reef Soundscapes off Sesoko Island, Okinawa, | 15 | "erc_what": "Coral Reef Soundscapes off Sesoko Island, Okinawa, | ||
16 | Japan", | 16 | Japan", | ||
17 | "erc_when": "201705-201807", | 17 | "erc_when": "201705-201807", | ||
18 | "erc_where": "https://pid.depositar.io/ark:37281/k5d515442", | 18 | "erc_where": "https://pid.depositar.io/ark:37281/k5d515442", | ||
19 | "erc_who": "Tzu-Hao Lin, Tomonari Akamatsu, Frederic Sinniger, Saki | 19 | "erc_who": "Tzu-Hao Lin, Tomonari Akamatsu, Frederic Sinniger, Saki | ||
20 | Harii", | 20 | Harii", | ||
21 | "groups": [ | 21 | "groups": [ | ||
22 | { | 22 | { | ||
23 | "description": "", | 23 | "description": "", | ||
24 | "display_name": "08. \u81ea\u7136\u8207\u7269\u7406\u79d1\u5b78 | 24 | "display_name": "08. \u81ea\u7136\u8207\u7269\u7406\u79d1\u5b78 | ||
25 | / Natural and physical sciences", | 25 | / Natural and physical sciences", | ||
26 | "id": "041eefbf-2eb2-4aff-9aed-5631d17cc465", | 26 | "id": "041eefbf-2eb2-4aff-9aed-5631d17cc465", | ||
27 | "image_display_url": | 27 | "image_display_url": | ||
28 | /data.depositar.io/uploads/group/2018-10-23-063044.410318icon-08.jpg", | 28 | /data.depositar.io/uploads/group/2018-10-23-063044.410318icon-08.jpg", | ||
29 | "name": "natural-and-physical-sciences", | 29 | "name": "natural-and-physical-sciences", | ||
30 | "title": "08. \u81ea\u7136\u8207\u7269\u7406\u79d1\u5b78 / | 30 | "title": "08. \u81ea\u7136\u8207\u7269\u7406\u79d1\u5b78 / | ||
31 | Natural and physical sciences" | 31 | Natural and physical sciences" | ||
32 | }, | 32 | }, | ||
33 | { | 33 | { | ||
34 | "description": "", | 34 | "description": "", | ||
35 | "display_name": "Asian Soundscape Monitoring Network ", | 35 | "display_name": "Asian Soundscape Monitoring Network ", | ||
36 | "id": "1bcc1993-657e-4e12-933c-63b780064000", | 36 | "id": "1bcc1993-657e-4e12-933c-63b780064000", | ||
37 | "image_display_url": "", | 37 | "image_display_url": "", | ||
38 | "name": "asian-soundscape-monitoring-network", | 38 | "name": "asian-soundscape-monitoring-network", | ||
39 | "title": "Asian Soundscape Monitoring Network " | 39 | "title": "Asian Soundscape Monitoring Network " | ||
40 | }, | 40 | }, | ||
41 | { | 41 | { | ||
42 | "description": | 42 | "description": | ||
43 | 2a\u6f6e\u3001\u6d77\u5cb8\u8cc7\u8a0a\u3001\u6697\u7901\u3002Features | 43 | 2a\u6f6e\u3001\u6d77\u5cb8\u8cc7\u8a0a\u3001\u6697\u7901\u3002Features | ||
44 | and characteristics of salt water bodies (excluding inland waters). | 44 | and characteristics of salt water bodies (excluding inland waters). | ||
45 | Examples: tides, tidal waves, coastal information, reefs.", | 45 | Examples: tides, tidal waves, coastal information, reefs.", | ||
46 | "display_name": "[ISO19115] \u6d77\u6d0b\u8cc7\u8a0a\u985e / | 46 | "display_name": "[ISO19115] \u6d77\u6d0b\u8cc7\u8a0a\u985e / | ||
47 | Oceans", | 47 | Oceans", | ||
48 | "id": "ea43fdab-1e00-449b-88b1-ed15e56120eb", | 48 | "id": "ea43fdab-1e00-449b-88b1-ed15e56120eb", | ||
49 | "image_display_url": "", | 49 | "image_display_url": "", | ||
50 | "name": "oceans", | 50 | "name": "oceans", | ||
51 | "title": "[ISO19115] \u6d77\u6d0b\u8cc7\u8a0a\u985e / Oceans" | 51 | "title": "[ISO19115] \u6d77\u6d0b\u8cc7\u8a0a\u985e / Oceans" | ||
52 | }, | 52 | }, | ||
53 | { | 53 | { | ||
54 | "description": | 54 | "description": | ||
55 | u6d0b\u751f\u6d3b\u3001\u6ebc\u5730\u3001\u68f2\u606f\u5730\u3002Flora | 55 | u6d0b\u751f\u6d3b\u3001\u6ebc\u5730\u3001\u68f2\u606f\u5730\u3002Flora | ||
56 | and/or fauna in natural environment. Examples: wildlife, vegetation, | 56 | and/or fauna in natural environment. Examples: wildlife, vegetation, | ||
57 | biological sciences, ecology, wilderness, sealife, wetlands, | 57 | biological sciences, ecology, wilderness, sealife, wetlands, | ||
58 | habitat.", | 58 | habitat.", | ||
59 | "display_name": "[ISO19115] \u751f\u7269\u751f\u614b\u985e / | 59 | "display_name": "[ISO19115] \u751f\u7269\u751f\u614b\u985e / | ||
60 | Biota", | 60 | Biota", | ||
61 | "id": "234ceb65-658b-46c4-95ad-68d6356523ce", | 61 | "id": "234ceb65-658b-46c4-95ad-68d6356523ce", | ||
62 | "image_display_url": "", | 62 | "image_display_url": "", | ||
63 | "name": "biota", | 63 | "name": "biota", | ||
64 | "title": "[ISO19115] \u751f\u7269\u751f\u614b\u985e / Biota" | 64 | "title": "[ISO19115] \u751f\u7269\u751f\u614b\u985e / Biota" | ||
65 | } | 65 | } | ||
66 | ], | 66 | ], | ||
67 | "id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | 67 | "id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | ||
68 | "isopen": true, | 68 | "isopen": true, | ||
69 | "keywords": [ | 69 | "keywords": [ | ||
70 | "Q1358257", | 70 | "Q1358257", | ||
71 | "Q11292" | 71 | "Q11292" | ||
72 | ], | 72 | ], | ||
73 | "language": [ | 73 | "language": [ | ||
74 | "eng" | 74 | "eng" | ||
75 | ], | 75 | ], | ||
76 | "license_id": "cc-by", | 76 | "license_id": "cc-by", | ||
77 | "license_title": "CC-BY 4.0", | 77 | "license_title": "CC-BY 4.0", | ||
78 | "license_url": "https://creativecommons.org/licenses/by/4.0/", | 78 | "license_url": "https://creativecommons.org/licenses/by/4.0/", | ||
79 | "maintainer": null, | 79 | "maintainer": null, | ||
80 | "maintainer_email": null, | 80 | "maintainer_email": null, | ||
81 | "metadata_created": "2020-12-01T16:06:27.426607", | 81 | "metadata_created": "2020-12-01T16:06:27.426607", | ||
t | 82 | "metadata_modified": "2023-09-05T17:18:58.307387", | t | 82 | "metadata_modified": "2023-09-05T17:19:40.847179", |
83 | "name": "coral-reef-sesoko", | 83 | "name": "coral-reef-sesoko", | ||
84 | "notes": "This dataset is an archive of audio data of shallow-water | 84 | "notes": "This dataset is an archive of audio data of shallow-water | ||
85 | and upper-mesophotic coral reefs off Sesoko Island, Okinawa, Japan. | 85 | and upper-mesophotic coral reefs off Sesoko Island, Okinawa, Japan. | ||
86 | Python codes to visualize the audio data are also provided in a | 86 | Python codes to visualize the audio data are also provided in a | ||
87 | notebook based on Google Colab.\r\n\r\n# Recording | 87 | notebook based on Google Colab.\r\n\r\n# Recording | ||
88 | Locations\r\n\r\nThree long-term recording sites were established | 88 | Locations\r\n\r\nThree long-term recording sites were established | ||
89 | since May 2017. Site A (N26.635\u00b0 E127.865\u00b0 ) is located on | 89 | since May 2017. Site A (N26.635\u00b0 E127.865\u00b0 ) is located on | ||
90 | the southeast coast of Sesoko Island and in front of the Sesoko | 90 | the southeast coast of Sesoko Island and in front of the Sesoko | ||
91 | Station of the University of the Ryukyus. The water depth is 1.5 m. | 91 | Station of the University of the Ryukyus. The water depth is 1.5 m. | ||
92 | Site B (N26.665\u00b0 E127.869\u00b0 ) is located at the bottom of a | 92 | Site B (N26.665\u00b0 E127.869\u00b0 ) is located at the bottom of a | ||
93 | reef slope on the north of Sesoko Island and the west of Toguchi Port. | 93 | reef slope on the north of Sesoko Island and the west of Toguchi Port. | ||
94 | The water depth is 20 m. Site C (N26.670\u00b0 E127.866\u00b0 ) is | 94 | The water depth is 20 m. Site C (N26.670\u00b0 E127.866\u00b0 ) is | ||
95 | located on a nearly flat plateau to the north of Sesoko Island and the | 95 | located on a nearly flat plateau to the north of Sesoko Island and the | ||
96 | west of Toguchi Port. The water depth is 40 m.\r\n\r\n# Acoustic | 96 | west of Toguchi Port. The water depth is 40 m.\r\n\r\n# Acoustic | ||
97 | Recorders\r\n\r\n[AUSOMS-mini stereo | 97 | Recorders\r\n\r\n[AUSOMS-mini stereo | ||
98 | corders](http://aqua-sound.com/en/pdf/aquasound_catalog_AUSOMS_en.pdf) | 98 | corders](http://aqua-sound.com/en/pdf/aquasound_catalog_AUSOMS_en.pdf) | ||
99 | (AquaSound, Kobe, Japan) were used to collect underwater sounds. From | 99 | (AquaSound, Kobe, Japan) were used to collect underwater sounds. From | ||
100 | May 2017 to July 2018, six AUSOMS-mini recorders were used: 14-0106, | 100 | May 2017 to July 2018, six AUSOMS-mini recorders were used: 14-0106, | ||
101 | 14-0107, 15-0106, 15-0107, 15-0109, 15-0110.\r\n\r\n# Configuration of | 101 | 14-0107, 15-0106, 15-0107, 15-0109, 15-0110.\r\n\r\n# Configuration of | ||
102 | Audio Recording\r\n\r\n(1) Duty Cycle: continuous. (2) Sampling Rate: | 102 | Audio Recording\r\n\r\n(1) Duty Cycle: continuous. (2) Sampling Rate: | ||
103 | 44.1kHz. (3) Channels: 2. (4) File Format: MP3 (128 kbps). (5) Audio | 103 | 44.1kHz. (3) Channels: 2. (4) File Format: MP3 (128 kbps). (5) Audio | ||
104 | Gain: High. (6) High Pass Filter: Off.\r\n\r\n# Field | 104 | Gain: High. (6) High Pass Filter: Off.\r\n\r\n# Field | ||
105 | Deployment\r\n\r\nAt each recording site, one AUSOMS-mini stereo | 105 | Deployment\r\n\r\nAt each recording site, one AUSOMS-mini stereo | ||
106 | recorder was fixed to a cement block at the seafloor. Each deployment | 106 | recorder was fixed to a cement block at the seafloor. Each deployment | ||
107 | lasted for a maximum of 29 days. Deployment and recovery of recorders | 107 | lasted for a maximum of 29 days. Deployment and recovery of recorders | ||
108 | were conducted by divers.\r\n\r\n# Data Processing\r\n\r\nAudio | 108 | were conducted by divers.\r\n\r\n# Data Processing\r\n\r\nAudio | ||
109 | recordings generated by AUSOMS-mini recorders were saved in MP3 | 109 | recordings generated by AUSOMS-mini recorders were saved in MP3 | ||
110 | format. Each MP3 is about 8-hour long and do not have a time stamp on | 110 | format. Each MP3 is about 8-hour long and do not have a time stamp on | ||
111 | the file name. To facilitate data management, we segmented the 8-hour | 111 | the file name. To facilitate data management, we segmented the 8-hour | ||
112 | long MP3 into WAV files of 5-min duration.\r\n\r\nWe used the | 112 | long MP3 into WAV files of 5-min duration.\r\n\r\nWe used the | ||
113 | [LTSA_gui](https://github.com/schonkopf/long-term-spectrogram) to | 113 | [LTSA_gui](https://github.com/schonkopf/long-term-spectrogram) to | ||
114 | generate long-term spectrograms (LTS) and save the LTS in mat files. | 114 | generate long-term spectrograms (LTS) and save the LTS in mat files. | ||
115 | Each mat file contains median-based LTS and mean-based LTS. | 115 | Each mat file contains median-based LTS and mean-based LTS. | ||
116 | Median-based LTS was obtained by measuring median power spectral | 116 | Median-based LTS was obtained by measuring median power spectral | ||
117 | densities within each 5-min segment. Mean-based LTS was obtained by | 117 | densities within each 5-min segment. Mean-based LTS was obtained by | ||
118 | measuring mean power spectral densities within each 5-min segment. | 118 | measuring mean power spectral densities within each 5-min segment. | ||
119 | \r\n\r\n# Associated Publication\r\n\r\nTzu-Hao Lin, Tomonari | 119 | \r\n\r\n# Associated Publication\r\n\r\nTzu-Hao Lin, Tomonari | ||
120 | Akamatsu, Frederic Sinniger, Saki Harii (2020) Exploring coral reef | 120 | Akamatsu, Frederic Sinniger, Saki Harii (2020) Exploring coral reef | ||
121 | biodiversity via underwater soundscapes. [Biological Conservation, | 121 | biodiversity via underwater soundscapes. [Biological Conservation, | ||
122 | 253: | 122 | 253: | ||
123 | https://www.sciencedirect.com/science/article/pii/S0006320720309599)", | 123 | https://www.sciencedirect.com/science/article/pii/S0006320720309599)", | ||
124 | "num_resources": 5, | 124 | "num_resources": 5, | ||
125 | "num_tags": 8, | 125 | "num_tags": 8, | ||
126 | "organization": { | 126 | "organization": { | ||
127 | "approval_status": "approved", | 127 | "approval_status": "approved", | ||
128 | "created": "2019-03-20T13:50:26.711089", | 128 | "created": "2019-03-20T13:50:26.711089", | ||
129 | "description": "[Project | 129 | "description": "[Project | ||
130 | s://meil.biodiv.tw/projects/biodiversity-listening-project)\r\n\r\nThe | 130 | s://meil.biodiv.tw/projects/biodiversity-listening-project)\r\n\r\nThe | ||
131 | ocean is full of sounds that are generated from geophysical events, | 131 | ocean is full of sounds that are generated from geophysical events, | ||
132 | marine animals, and human activities. By using a hydrophone (a | 132 | marine animals, and human activities. By using a hydrophone (a | ||
133 | microphone for underwater use), we can hear chirps of marine mammals, | 133 | microphone for underwater use), we can hear chirps of marine mammals, | ||
134 | choruses of soniferous fish, and pulsed sounds of benthic | 134 | choruses of soniferous fish, and pulsed sounds of benthic | ||
135 | invertebrates. These bioacoustic signals reveal the status of marine | 135 | invertebrates. These bioacoustic signals reveal the status of marine | ||
136 | biodiversity and ecosystem health. On the other hand, the increased | 136 | biodiversity and ecosystem health. On the other hand, the increased | ||
137 | maritime traffic, over-exploitation of marine resources, and the | 137 | maritime traffic, over-exploitation of marine resources, and the | ||
138 | development of renewable energy have led to a global increase in | 138 | development of renewable energy have led to a global increase in | ||
139 | underwater noise. Listening to underwater sounds allows us to remotely | 139 | underwater noise. Listening to underwater sounds allows us to remotely | ||
140 | acquire ecological data of marine biodiversity and investigate the | 140 | acquire ecological data of marine biodiversity and investigate the | ||
141 | changes of biodiversity in response to climate change and | 141 | changes of biodiversity in response to climate change and | ||
142 | anthropogenic development.\r\n\r\nIn this project, we attempt to | 142 | anthropogenic development.\r\n\r\nIn this project, we attempt to | ||
143 | establish a large-scale soundscape monitoring network and characterize | 143 | establish a large-scale soundscape monitoring network and characterize | ||
144 | ecosystem-specific soundscapes by separating sounds from geophonic, | 144 | ecosystem-specific soundscapes by separating sounds from geophonic, | ||
145 | biological, and anthropogenic sources. Based on information retrieval | 145 | biological, and anthropogenic sources. Based on information retrieval | ||
146 | techniques, the acoustic data are transformed into metrics that | 146 | techniques, the acoustic data are transformed into metrics that | ||
147 | describe the quality of acoustic habitat, the behavior of soniferous | 147 | describe the quality of acoustic habitat, the behavior of soniferous | ||
148 | animals, and noise-generating activities. The outcomes will allow | 148 | animals, and noise-generating activities. The outcomes will allow | ||
149 | managers and stakeholders to use soundscape information to monitor the | 149 | managers and stakeholders to use soundscape information to monitor the | ||
150 | trends of marine ecosystems and perform data-driven decision making in | 150 | trends of marine ecosystems and perform data-driven decision making in | ||
151 | conservation management.", | 151 | conservation management.", | ||
152 | "id": "47760d14-e284-4655-b5d0-42d268420f0c", | 152 | "id": "47760d14-e284-4655-b5d0-42d268420f0c", | ||
153 | "image_url": "2023-09-05-171148.398654Labphoto.JPG", | 153 | "image_url": "2023-09-05-171148.398654Labphoto.JPG", | ||
154 | "is_organization": true, | 154 | "is_organization": true, | ||
155 | "name": "oceanbiodiversity", | 155 | "name": "oceanbiodiversity", | ||
156 | "state": "active", | 156 | "state": "active", | ||
157 | "title": "Ocean Biodiversity Listening Project", | 157 | "title": "Ocean Biodiversity Listening Project", | ||
158 | "type": "organization" | 158 | "type": "organization" | ||
159 | }, | 159 | }, | ||
160 | "owner_org": "47760d14-e284-4655-b5d0-42d268420f0c", | 160 | "owner_org": "47760d14-e284-4655-b5d0-42d268420f0c", | ||
161 | "private": false, | 161 | "private": false, | ||
162 | "process_step": "", | 162 | "process_step": "", | ||
163 | "relationships_as_object": [], | 163 | "relationships_as_object": [], | ||
164 | "relationships_as_subject": [], | 164 | "relationships_as_subject": [], | ||
165 | "remarks": "", | 165 | "remarks": "", | ||
166 | "resources": [ | 166 | "resources": [ | ||
167 | { | 167 | { | ||
168 | "cache_last_updated": null, | 168 | "cache_last_updated": null, | ||
169 | "cache_url": null, | 169 | "cache_url": null, | ||
170 | "created": "2020-12-03T12:42:57.087085", | 170 | "created": "2020-12-03T12:42:57.087085", | ||
171 | "datastore_active": false, | 171 | "datastore_active": false, | ||
172 | "datastore_contains_all_records_of_source_file": false, | 172 | "datastore_contains_all_records_of_source_file": false, | ||
173 | "description": "A link to a shared Drive folder of underwater | 173 | "description": "A link to a shared Drive folder of underwater | ||
174 | recordings (WAV) and long-term spectrograms (MAT).", | 174 | recordings (WAV) and long-term spectrograms (MAT).", | ||
175 | "format": "", | 175 | "format": "", | ||
176 | "hash": "", | 176 | "hash": "", | ||
177 | "id": "4dbcbc3b-7526-4aee-ac2d-42a7a90e6fdb", | 177 | "id": "4dbcbc3b-7526-4aee-ac2d-42a7a90e6fdb", | ||
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180 | "mimetype": null, | 180 | "mimetype": null, | ||
181 | "mimetype_inner": null, | 181 | "mimetype_inner": null, | ||
182 | "name": "Audio data", | 182 | "name": "Audio data", | ||
183 | "package_id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | 183 | "package_id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | ||
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186 | "size": null, | 186 | "size": null, | ||
187 | "state": "active", | 187 | "state": "active", | ||
188 | "url": | 188 | "url": | ||
189 | ogle.com/drive/folders/1euUywVHE2xG6dmGdZ2eJzVkwi1dsVQKe?usp=sharing", | 189 | ogle.com/drive/folders/1euUywVHE2xG6dmGdZ2eJzVkwi1dsVQKe?usp=sharing", | ||
190 | "url_type": null | 190 | "url_type": null | ||
191 | }, | 191 | }, | ||
192 | { | 192 | { | ||
193 | "cache_last_updated": null, | 193 | "cache_last_updated": null, | ||
194 | "cache_url": null, | 194 | "cache_url": null, | ||
195 | "created": "2020-12-03T12:45:33.913140", | 195 | "created": "2020-12-03T12:45:33.913140", | ||
196 | "datastore_active": false, | 196 | "datastore_active": false, | ||
197 | "datastore_contains_all_records_of_source_file": false, | 197 | "datastore_contains_all_records_of_source_file": false, | ||
198 | "description": "A mat file contains the median- and mean-based | 198 | "description": "A mat file contains the median- and mean-based | ||
199 | long-term spectrograms.", | 199 | long-term spectrograms.", | ||
200 | "format": "mat", | 200 | "format": "mat", | ||
201 | "hash": "", | 201 | "hash": "", | ||
202 | "id": "c0cbd9c6-a63e-4374-b0a5-d71297d57acd", | 202 | "id": "c0cbd9c6-a63e-4374-b0a5-d71297d57acd", | ||
203 | "last_modified": "2020-12-27T09:33:50.112766", | 203 | "last_modified": "2020-12-27T09:33:50.112766", | ||
204 | "metadata_modified": "2023-09-05T17:16:47.043497", | 204 | "metadata_modified": "2023-09-05T17:16:47.043497", | ||
205 | "mimetype": null, | 205 | "mimetype": null, | ||
206 | "mimetype_inner": null, | 206 | "mimetype_inner": null, | ||
207 | "name": "Long-term spectrogram of Site A", | 207 | "name": "Long-term spectrogram of Site A", | ||
208 | "package_id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | 208 | "package_id": "e134871c-81fb-4aa6-a08b-fb536a36ccfc", | ||
209 | "position": 1, | 209 | "position": 1, | ||
210 | "resource_type": null, | 210 | "resource_type": null, | ||
211 | "size": 141770285, | 211 | "size": 141770285, | ||
212 | "state": "active", | 212 | "state": "active", | ||
213 | "url": | 213 | "url": | ||
214 | esource/c0cbd9c6-a63e-4374-b0a5-d71297d57acd/download/SSK_Site_A.mat", | 214 | esource/c0cbd9c6-a63e-4374-b0a5-d71297d57acd/download/SSK_Site_A.mat", | ||
215 | "url_type": "upload" | 215 | "url_type": "upload" | ||
216 | }, | 216 | }, | ||
217 | { | 217 | { | ||
218 | "cache_last_updated": null, | 218 | "cache_last_updated": null, | ||
219 | "cache_url": null, | 219 | "cache_url": null, | ||
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